Table 5.
2-SNP combination | ||||
10 SNPa:15 SNPb | 2 : 0 | 1 : 1 | 0 : 2 | |
N comb | 90 | 300 | 210 | |
10 | 23 | 3 | ||
0.28 | 0.64 | 0.08 | ||
0.15 | 0.5 | 0.35 | ||
1.85 | 1.28 | 0.24 | ||
3-SNP combination | ||||
10 SNPa : 15 SNPb | 3 : 0 | 2 : 1 | 1 : 2 | 0 : 3 |
N comb | 360 | 2025 | 3150 | 1365 |
25 | 82 | 64 | 39 | |
0.12 | 0.39 | 0.30 | 0.19 | |
0.05 | 0.29 | 0.46 | 0.20 | |
2.28 | 1.33 | 0.67 | 0.94 |
aSelected by PDM
bNot including 10 SNP selected by PDM
cThe number of 2-SNP combination that satisfies the following conditions:P-value < 0.05 and ECV2<0.5.
The number of 3-SNP combination that satisfies the conditions: P-value < 0.05 and ECV3 < 0.5.