Table 6.
Two-SNP interactions among the 10 selected SNPs (P-value < 0.05 and ECV2 < 0.5)
SNP 1 | SNP 1 genotype | SNP 2 | Pa | Pb | Pc | Pb × Pc | Pa/(Pb × Pc) |
C3 (4896 C/T) | TT | C3 (1692 G/A) | 0.01461 | 0.7205 | 0.6993 | 0.5038 | 0.0290 |
CysLT2 (2534 A/G) | AG+GG | IL-4Rα (148 G/A) | 0.00030 | 0.5664 | 0.0155 | 0.0088 | 0.0344 |
C3 (1692 G/A) | AA | C3 (4896 C/T) | 0.02858 | 0.6993 | 0.7205 | 0.5038 | 0.0567 |
C3 (912 G/A) | GG | C3 (4896 C/T) | 0.02345 | 0.5020 | 0.7205 | 0.3617 | 0.0648 |
C3 (4896 C/T) | TT | C3 (912 G/A) | 0.03073 | 0.7205 | 0.5020 | 0.3617 | 0.0850 |
C3 (1692 G/A) | GA | CysLT2 (2534 A/G) | 0.04917 | 0.6993 | 0.5664 | 0.3961 | 0.1241 |
STAT6 (2964 G/A) | GG+GA | IL-10 (-571 C/A) | 0.01752 | 0.7881 | 0.1074 | 0.0846 | 0.2070 |
C3 (4896 C/T) | TT | IL-4Rα (148 G/A) | 0.00271 | 0.7205 | 0.0155 | 0.0112 | 0.2426 |
C3 (912 G/A) | GG | IL-4Rα (148 G/A) | 0.00345 | 0.5020 | 0.0155 | 0.0078 | 0.4442 |
IL-4 (-590 C/T) | CT+TT | IL-4Rα (148 G/A) | 0.00689 | 0.9085 | 0.0155 | 0.0141 | 0.4896 |
aP-value of combination of SNP 2 with genotype consisting of SNP 1. In this case, D.F. of SNP 2 is identical to that of Table 1.
bP-value of SNP 1 calculated alone.
cP-value of SNP 2 calculated alone.
aP/(bP × cP) represents effective combination value (ECV2).