Table 1.
Name of microRNA | The microRNA expressions of CR-formation versus naïve control in the barrel cortex | Predicted target genes | Functions of target genes (+), upregulation (−), downregulation |
Effects of microRNA expression changes on CR-formation |
---|---|---|---|---|
mmu-miR-5128 | ↓ | Fgfr2 Neto1 |
Excitatory synapses (+) | Upregulate excitatory synapses |
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mmu-miR-342-5p | ↓ | Elfn1 Fgfr2 Gria1 Grin1 Lrrtm2 Nlgn3 |
Excitatory synapses (+) | Upregulate excitatory synapses |
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mmu-miR-342-5p | ↓ | Nrxn1 Nlgn3 |
Synapse formation (+) | Upregulate synapse formation |
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mmu-miR-150-5p | ↑ | Nlgn2 Csnk1d |
Excitatory synapses (−) Neuron outgrowth (−) |
Upregulate excitatory synapses Upregulate neuron outgrowth |
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mmu-miR-3072-3p | ↑ | Wnk2 | Channels (+/−) | Upregulate excitatory synapses |
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mmu-miR-3072-3p | ↑ | Slc32a1 | Inhibitory synapses (+) | Downregulate inhibitory synapses |
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mmu-miR-150-5p | ↑ | Nlgn2 | Inhibitory synapses (+) | Downregulate inhibitory synapses |
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mmu-miR-324-5p | ↑ | Slc32a1 | Inhibitory synapses (+) | Downregulate inhibitory synapses |
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mmu-miR-23b-3p | ↑ | Nrxn1 | Inhibitory synapses (+) | Downregulate inhibitory synapses |
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mmu-miR-133a-3p | ↑ | Iqsec3 | Inhibitory synapses (+) | Downregulate inhibitory synapses |
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mmu-miR-345-5p | ↑ | Gabra4 | Inhibitory synapses (+) | Downregulate inhibitory synapses |
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mmu-miR-345-5p | ↑ | Rgma | Synapse formation or neuron branching (−) Spines and dendrites (−) |
Upregulate synapse formation or neuron branching Stabilize spines and dendrites |
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mmu-miR-324-5p | ↑ | Ttbk1 | Spines and dendrites (−) Axon guidance (−) |
Stabilize spines and dendrites Upregulate axon growth and branching |
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mmu-miR-3072-3p | ↑ | Mark2 | Axon guidance (−) | Upregulate axon growth and branching |
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mmu-miR-133a-3p | ↑ | Dyrk2 | Axon guidance (−) Cytoskeleton (−) Neurite outgrowth (−) Neuron proliferation (−) |
Upregulate axon growth and branching Stabilize neuron morphology Upregulate dendrite growth Upregulate neuron proliferation |