Table 5.
Comparisons of running times of different GRN inference methods
Method | CPU time (in seconds) | |||
---|---|---|---|---|
DREAM4 (the average of 5 networks) | DREAM5 Network 1 | DREAM4 Network 3 | DREAM4 Network 4 | |
GENIE3 | 47.73 | 3.51E + 4 | 1.36E + 5 | 1.17E + 5 |
TIGRESS | 160.41 | 3.06E + 4 | 9.08E + 4 | 7.02E + 4 |
PLSNET | 136.71 | 4.22E + 3 | 1.66E + 4 | 2.09E + 4 |