Table 2.

Number of outlier SNPs detected using BayeScan, Bayenv2, and LFMM in Pinus strobus and P. monticola. A false discovery rate of 5% was used for BayeScan and LFMM, and Bayes factor >3 was used for Bayenv2

	P. strobus a	P. monticola a
BayeScan
Divergent	2	1
Balancing	3	0
Total (%)a	5 (3.3)	1 (0.6)
Bayenv2 (%)a	12 (7.8)	12 (7.6)
LFMM (%)a	19 (12.4)	6 (3.8)
Total (%)a	29 (19.0)	18 (11.4)

^aNumbers in parentheses indicate the proportion of outlier SNPs (number of outlier SNPs/number of SNPs tested).