. 2016 Oct 27;6(24):8649–8664. doi: 10.1002/ece3.2550

Table 4.

Genes containing outlier SNPs (any of BayeScan, Bayenv2, or LFMM) in both Pinus monticola and Pinus strobus

SNP	Gene	P. strobus		P. monticola		SNP annotation	Putative gene function (RefSeq)	Candidate for growth/phenology in Picea glauca a
SNP	Gene	F _ST outlier	GEA	F _ST outlier	GEA	SNP annotation	Putative gene function (RefSeq)	Candidate for growth/phenology in Picea glauca a
T‐019	2_4724_01	ns	DD5, bFFP, eFFP*^, c	ns	ns	Intron	Serine–threonine‐protein kinase‐se HT1‐like	Yes
S‐021	2_4724_01	–	–	ns	bFFP, Elev*^, b	Intron	Serine–threonine‐protein kinase‐se HT1‐like	Yes
N‐033	0_7001_01	ns	DD5, eFFP, bFFP, PAS**^, c	–	–	NS	NADPH‐dependent diflavin oxidoreductase ATR3‐like isoform 2	No
P‐034	0_7001_01	–	–	ns	TD, eFFP*^, b	S	NADPH‐dependent diflavin oxidoreductase ATR3‐like isoform 2	No
O‐027	2_9665_01	ns	bFFP*^, b	–	–	NS	Interferon‐induced guanylate‐binding protein	No
Q‐032	2_9665_01	–	–	ns	PAS*^, c	S	Interferon‐induced guanylate‐binding protein	No

ns, nonsignificant; “–”, not tested because the SNP was not genotyped or was monomorphic in this species; S, synonymous SNP; NS, nonsynonymous SNP; na, not annotated (no blast hit).

^aBased on a blastn against the P. glauca gene catalogue (see “Materials and Methods”).

^bSNP detected by Bayenv2; *BF > 3; **BF > 10; ***BF > 32; ****BF > 100; ****BF > 100: ^cSNP detected by LFMM: *q < 0.05; **q < 0.01; ***q < 0.001, ****q < 0.0001.