Table 4. Haplotype results generated using Haploview.
Haplotypes | Haplotype Frequency | Suicide Attempter Frequencies | Non-attempter Frequencies | Chi Square | Uncorrected P-value | |
---|---|---|---|---|---|---|
Block 1 | CCCA | 0.45 | 0.46 | 0.45 | 0.71 | 0.40 |
CCCC | 0.26 | 0.26 | 0.27 | 0.15 | 0.70 | |
CACC | 0.19 | 0.18 | 0.20 | 0.71 | 0.40 | |
AAAC | 0.091 | 0.092 | 0.090 | 0.038 | 0.85 | |
Block 2 | CCCCCCCCC | 0.52 | 0.51 | 0.52 | 0.089 | 0.77 |
CACCCCACA | 0.16 | 0.16 | 0.16 | 0.012 | 0.91 | |
CCCACCCAC | 0.097 | 0.11 | 0.087 | 2.28 | 0.13 | |
ACACAAACA | 0.092 | 0.093 | 0.091 | 0.015 | 0.90 | |
CCCCCCCAC | 0.051 | 0.054 | 0.049 | 0.24 | 0.63 | |
CCCCCCACA | 0.031 | 0.027 | 0.035 | 1.035 | 0.31 | |
CCACCCCCA | 0.026 | 0.023 | 0.030 | 0.77 | 0.38 | |
CCCCCCCCA | 0.021 | 0.016 | 0.026 | 2.45 | 0.12 | |
Block 3 | ACCCCACCACCCC | 0.26 | 0.26 | 0.26 | 0.11 | 0.74 |
CCACCCAACAACC | 0.19 | 0.18 | 0.20 | 1.22 | 0.27 | |
CACCACCCCCCCC | 0.18 | 0.18 | 0.18 | 0.00 | 1.00 | |
CCCCCCCACAAAA | 0.17 | 0.18 | 0.17 | 0.46 | 0.50 | |
CCAACCAACAACC | 0.062 | 0.070 | 0.055 | 1.69 | 0.19 | |
CCCCCCCCCCCCC | 0.054 | 0.045 | 0.063 | 2.75 | 0.097 | |
CCACCCCACAAAA | 0.024 | 0.025 | 0.022 | 0.19 | 0.66 | |
CCACCACCACCCC | 0.014 | 0.017 | 0.011 | 1.37 | 0.24 |
All default values were used apart from the minimum minor allele frequency which was changed to 0.05.