Table 2. SNPs surpassing the suggestive significance level for muscle fat content and abdominal fat traits.

Trait	LG/Scaffolda	SNP	Position (bp)	Min/Majb	MAFc	GWASP-valued	Nearest Genee	Locationf
MFdo	17	carp139438	14592774	C/T	0.321	9.96E-05	ankrd10a	CDS
	33	carp192675	11483577	C/A	0.307	8.34E-05		Intergenic
	40	carp196436	5193668	A/G	0.314	1.05E-04	tanc2	CDS
	40	carp160064	11580617	A/C	0.304	1.11E-04	tanc2	CDS
	000000633	carp151503	840247	G/A	0.319	6.27E-05	fjx1	CDS
	000000761	carp100237	475274	T/C	0.295	1.07E-04		Intergenic
	000001231	carp249684	149043	T/A	0.309	1.09E-04	chka	U
	000002508	carp040917	29605	A/G	0.295	7.29E-05	adam8a	CDS
MFab	9	carp077510	7112924	A/G	0.490	9.02E-05	zfand5a	CDS
	23	carp153837	560892	A/G	0.483	1.07E-04		Intergenic
AbFW	17	carp139438	14592774	C/T	0.322	1.05E-04	ankrd10a	CDS
	21	carp244344	11825770	C/T	0.393	1.15E-05	iffo2	U
	35	carp202744	18344603	A/C	0.390	1.63E-05	kpna4	Intron
	000000247	carp144593	4006	C/T	0.388	2.48E-05		Intergenic
	000000386	carp089419	61091	T/C	0.395	3.33E-06		Intergenic
	000000695	carp128748	216424	A/G	0.393	1.23E-05	clcn3	Intron
AbFP	21	carp244344	11825770	C/T	0.390	1.12E-05	iffo2	U
	34	carp196106	4811371	T/C	0.497	7.95E-05	apoer2	D
	35	carp202744	18344603	A/C	0.388	3.57E-05	kpna4	Intron
	000000247	carp144593	4006	C/T	0.385	3.72E-05		Intergenic
	000000386	carp089419	61091	T/C	0.393	4.56E-06		Intergenic
	000000695	carp128746	215184	G/C	0.505	5.75E-05	clcn3	Intron
	000000695	carp128748	216424	A/G	0.390	8.35E-06	clcn3	Intron
	000028813	carp058937	486629	C/A	0.502	3.87E-05		Intergenic

^a SNP location on linkage group or scaffold in the common carp 250K array

^b Minor allele/Major allele

^c minor allele frequency

^d the bold P-values of SNPs are the genome-wide significant level

^e Gene location on the common carp assembly version1

^f D and U indicate that the SNP is downstream and upstream of the gene (< 5 Kb), respectively; CDS indicates coding sequence region.