TABLE 1.
Genea | No. of carbon-limited reads/kbpb |
Log2 fold change posttreatment/pretreatmentc |
||
---|---|---|---|---|
Pretreatment | Posttreatment | Carbon limited | Nitrogen limited | |
ydgH | 758 | 60 | −3.7 | 0.7 |
bssR | 2,000 | 279 | −2.8 | 0.9 |
tatB | 3,841 | 558 | −2.8 | 0.2 |
wecA (rfe) | 2,043 | 323 | −2.7 | −0.3 |
ftsN | 10,134 | 1,618 | −2.6 | −0.5 |
ompA | 2,108 | 354 | −2.6 | −0.1 |
dacA | 867 | 162 | −2.4 | −1.2 |
sanA | 3,261 | 625 | −2.4 | −0.2 |
ytfK | 7,816 | 2,135 | −1.9 | 0.9 |
wecE | 1,834 | 531 | −1.8 | 0.9 |
rfaH | 3,155 | 1,004 | −1.7 | 0.4 |
yhdP | 2,386 | 760 | −1.7 | 0.3 |
Genes with at least 700 sequence reads decreasing at least 3-fold during treatment under carbon-limiting conditions and changing less than 3-fold under nitrogen-limiting conditions.
The number of sequence reads for each gene was normalized to the length of the gene.
The fold change in read number before and after SDS treatment under either carbon- or nitrogen-limiting conditions.