Table 3.
Name | Adducteda | LJ_CHARMM | APBS | CHEMPLP | XScore |
---|---|---|---|---|---|
(kcal/mol) | (kJ/mol) | (kcal/mol) | (kcal/mol) | ||
Lys75 | DHPLys | −98.53 | −64.30 | −58.58 | −9.03 |
Lys75 | No | −42.41 | −34.90 | −34.06 | −5.68 |
Difference | −56.13 | −29.40 | −24.52 | −3.35 | |
Lys337 | DHPLys | −29.22 | −95.00 | −58.48 | −6.29 |
Lys337 | No | −21.49 | −58.98 | −58.57 | −5.11 |
Difference | −7.73 | −36.02 | +0.09 | −1.18 | |
Lys499 | DHPLys | −54.98 | −33.30 | −34.35 | −5.93 |
Lys499 | No | −27.52 | −37.63 | −39.64 | −4.25 |
Difference | −27.46 | +4.33 | +5.29 | −1.68 | |
Lys588 | DHPLys | −22.42 | −97.60 | −47.77 | −5.77 |
Lys588 | No | −11.50 | −80.89 | −37.14 | −4.90 |
Difference | −10.92 | −16.71 | −10.63 | −0.87 | |
Lys598 | DHPLys | −27.53 | −72.20 | −67.40 | −5.56 |
Lys598 | No | −33.47 | −42.50 | −63.55 | −5.86 |
Difference | +5.94 | −29.70 | −3.85 | +0.30 | |
Arg361 | RP | −56.90 | −52.30 | −50.12 | −8.62 |
Arg361 | No | −60.09 | −4.12 | −25.43 | −6.19 |
Difference | +3.18 | −48.18 | −24.69 | −2.43 | |
Mean | DHPLYS + RP | −48.26 | −69.12 | −52.78 | −6.70 |
Mean | NO | −32.74 | −43.17 | −43.07 | −5.33 |
Mean | Difference | −15.52 | −25.95 | −9.72 | −1.37 |
Data are derived from Dataset S1 and refers to the modified residues in MDA-treated HSA.