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. 2016 Dec 18;11:275–285. doi: 10.1016/j.redox.2016.12.017

Table 3.

Comparison of representative docking scores for the adducted and unmodified amino acid residues of HSA plus overall score means.

Name Adducteda LJ_CHARMM APBS CHEMPLP XScore
(kcal/mol) (kJ/mol) (kcal/mol) (kcal/mol)
Lys75 DHPLys −98.53 −64.30 −58.58 −9.03
Lys75 No −42.41 −34.90 −34.06 −5.68
Difference −56.13 −29.40 −24.52 −3.35



Lys337 DHPLys −29.22 −95.00 −58.48 −6.29
Lys337 No −21.49 −58.98 −58.57 −5.11
Difference −7.73 −36.02 +0.09 −1.18



Lys499 DHPLys −54.98 −33.30 −34.35 −5.93
Lys499 No −27.52 −37.63 −39.64 −4.25
Difference −27.46 +4.33 +5.29 −1.68



Lys588 DHPLys −22.42 −97.60 −47.77 −5.77
Lys588 No −11.50 −80.89 −37.14 −4.90
Difference −10.92 −16.71 −10.63 −0.87



Lys598 DHPLys −27.53 −72.20 −67.40 −5.56
Lys598 No −33.47 −42.50 −63.55 −5.86
Difference +5.94 −29.70 −3.85 +0.30



Arg361 RP −56.90 −52.30 −50.12 −8.62
Arg361 No −60.09 −4.12 −25.43 −6.19
Difference +3.18 −48.18 −24.69 −2.43



Mean DHPLYS + RP −48.26 −69.12 −52.78 −6.70
Mean NO −32.74 −43.17 −43.07 −5.33
Mean Difference −15.52 −25.95 −9.72 −1.37
a

Data are derived from Dataset S1 and refers to the modified residues in MDA-treated HSA.