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. 2016 Sep 15;595(1):363–384. doi: 10.1113/JP272489

Figure 1. Characteristics of RNA‐seq dataset and transcript filtering.

Figure 1

A, overview of the filtering process used to generate differentially expressed transcripts between 8‐ and 14‐week‐old wheel running rats. For each group, a transcript was omitted if it was not a known transcript. B, RNA‐seq data were highly reliable as demonstrated by the high correlation (r = 0.995) of RPKM values from a single rat compared to RPKM average values from all rats. Both 8‐ and 14‐week‐old groups expressed high amounts of Grd1 (C) and Grd2 (D), which is indicative of NAc MSNs. FDR, false discovery rate; DET, differentially expressed transcripts.