Table 1. GWAS data sets with individual level data.
| Data source | Ancestry | Diseases | (Cases, controls) | Cross-validation |
|---|---|---|---|---|
| WTCCC | European | Bipolar disorder | (1817, 2928) | 5-fold |
| European | Coronary artery disease | (1878, 2928) | 5-fold | |
| European | Crohn’s disease | (1729, 2928) | 5-fold | |
| European | Hypertension | (1934, 2928) | 5-fold | |
| European | Rheumatoid | (1894, 2928) | 5-fold | |
| European | Type 1 diabetes | (1939, 2928) | 5-fold | |
| NCI GWAS | European | Bladder cancer | (5937, 10862) | 10-fold |
| Asian | Lung cancer in non-smoking females | (5510, 4544) | 10-fold | |
| European | Pancreatic cancer | (5066, 8807) | 10-fold |