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. 2016 Dec 30;83(2):e01955-16. doi: 10.1128/AEM.01955-16

TABLE 2.

Characteristics of population bins extracted from the FrBGR reactor

ID Population bin “species name”a Estimated (%):
Strain heterogeneity Bin size (Mbp)
Completeness Contamination
Dglo Dictyoglomus thermophilum 98 0 0 1.9
Tyel Thermodesulfovibrio yellowstonii 98 9 95 2.2
Swol Syntrophomonas wolfei cluster 1 (Swol_c1) 95 5 54 2.9
Syntrophomonas wolfei cluster 2 (Swol_c2) 20 9 67 2.1
Prot Unclassified Proteobacteria 94 3 33 4.1
Tpha Thermacetogenium phaeum cluster 1 (Tpha_c1) 93 4 70 2.4
Thermacetogenium phaeum cluster 2 (Tpha_c2) 76 12 80 1.8
unFi unFirm02_FrBGR cluster 2 (unFi_c2) 86 5 100 2.1
unFirm02_FrBGR cluster 1 (unFi_c1) 82 2 0 2.2
Athe Anaerolinea thermophila 85 6 30 2.7
Atri Unclassified Atribacteria bacterium (OP9) cluster 1 (Atri_c1) 84 43 98 2.7
Unclassified Atribacteria bacterium (OP9) cluster 2 (Atri_c2) 41 15 100 1.8
Cste Clostridium stercorarium cluster 2 (Cste_c2) 83 4 36 2.1
Clostridium stercorarium cluster 1 (Cste_c1) 72 11 6 1.8
Plan Unclassified Planctomycetes 83 8 82 4.1
Lcri Lactobacillus crispatus 83 32 100 2.0
Cthe Clostridium thermocellum 83 5 30 2.9
Bado Bifidobacterium adolescentis 86 11 75 1.7
Lraf Lactococcus raffinolactis 73 7 73 1.6
Fpen Fervidobacterium pennivorans cluster 1 (Fpen_c1) 67 14 73 1.7
Fervidobacterium pennivorans cluster 2 (Fpen_c2) 58 16 12 1.2
Acti Unclassified Actinobacteria 55 18 12 2.4
Ther Unclassified Thermoanaerobacteraceae 45 31 67 1.3
Tace Tepidanaerobacter acetatoxydans 35 8 94 1.0
Ccla Clostridium clariflavum 25 2 0 2.5
Pthe Pelotomaculum thermopropionicum 20 3 0 1.0
Fnod Fervidobacterium nodosum 16 2 0 0.5
Mbt Methanothermobacter thermautotrophicus 15 1 100 0.3
Mst Methanosaeta thermophila 8 0 0 0.1
Cprob Coprothermobacter spp. 100 2,902 93 58
Amobb Anaerobaculum spp. 100 1,100 84 24
Slipb Syntrophothermus spp. 93 77 7 3.8
a

Taxonomic assignment of uncultured phylotypes was based on PhyloPythiaS+ analysis.

b

Higher-ranked population bin.