Table 1. Nucleic acid extraction and amplification systems for the detection of cytomegalovirus and Epstein-Barr virus.
System | QIAsymphony RGQ | QIAcube | ||
---|---|---|---|---|
Extraction kit | QIAsymphony DNA Mini Kit | QIAamp DSP DNA Mini Kit | ||
Available sample type* | Whole blood, buffy coat, cultured cells, tissue, bacterial cultures | Whole blood, plasma, serum, buffy coat, lymphocytes, dried blood spot, body fluids, cultured cells, swabs, tissue | ||
Lysis | Chemical | Chemical enzyme | ||
Isolation method | Paramagnetic bead binding | Silica spin-column binding (centrifugation) | ||
Batch capacity | 24 | 12 | ||
Minimum sample requirement (µL) | 300 (dead volume, 100) | 200 | ||
Elution volume (µL) | 90 | 100 | ||
Final reaction volume (template + master mix, µL) | 20 + 30 | 20 + 30 |
*Technical specifications as indicated in the manufacturer's instructions; †Analytical sensitivity (limit of quantification) was defined as the concentration at which 95% of replicates were detected; ‡Corresponding to 1.0 copy/mL.
Abbreviations: CMV, cytomegalovirus; EBV, Epstein-Barr virus; CSF, cerebrospinal fluid; Ct, threshold cycle; IC, internal control; MIE, major immediate early.