Table 2.
Average R2 estimates of learning techniques with 100 repetitions.
| Dataset | SVR (lin) | SVR (pol) | SVR bagging | RT | RT bagging | GBM |
|---|---|---|---|---|---|---|
| GSE1938 | 0.962∗∗ | 0.874∗∗ | 0.941∗∗↓ | 0.838∗∗ | 0.724∗∗↓ | 0.943∗∗↑ |
| GSE12817 | 0.978∗∗ | 0.925∗∗ | 0.963∗∗↓ | 0.792∗∗ | 0.847∗∗↑ | 0.945∗∗↑ |
| GSE3078 | 0.639∗ | 0.583∗ | 0.538∗↓ | 0.759∗∗ | 0.739∗∗↓ | 0.760∗∗↑ |
| GSE10748 | 0.367 | 0.289 | 0.303↓ | 0.254 | 0.290↑ | 0.263↑ |
| GSE15457 | 0.879∗∗ | 0.407∗ | 0.769∗∗↓ | 0.720∗∗ | 0.231↓ | 0.884∗∗↑ |
| GSE8982 | 0.740∗∗ | 0.686∗∗ | 0.574∗∗↓ | 0.593∗∗ | 0.616∗∗↑ | 0.720∗∗↑ |
| GSE14954 | 0.804∗∗ | 0.653∗∗ | 0.710∗∗↓ | 0.426∗ | 0.584∗∗↑ | 0.781∗∗↑ |
| GSE9751 | 0.552∗∗ | 0.363∗ | 0.457∗↓ | 0.135 | 0.275↑ | 0.275↑ |
| GSE7955 | 0.549∗∗ | 0.466∗∗ | 0.443∗↓ | 0.198 | 0.300∗↑ | 0.325∗↑ |
| GSE2409 | 0.814∗∗ | 0.263∗ | 0.714∗∗↓ | 0.440∗∗ | 0.538∗∗↑ | 0.644∗∗↑ |
| GSE9539 | 0.867∗∗ | 0.700∗∗ | 0.823∗∗↓ | 0.552∗∗ | 0.664∗∗↑ | 0.833∗∗↑ |
Bold indicates the best performance; ↑: increase in R2; ↓: decrease in R2 compared to single performance. ∗∗ and ∗: significant at 0.001 and 0.05 level, respectively. SVR (lin), SVR (pol), and RT are single performances, while the others are ensemble performances of the methods.