Table S4.
Primers used in this study
| Name | Sequence (5′ to 3′) | Remark |
| Markers for map-based cloning | ||
| pj23-F | AGAGAGAACTCTGCCAATATC | SSR |
| pj23-R | AAAGTAACCCCTGCATAGACT | |
| P1-F | TCCTGTGGTCCAATCAAACG | CAPS, MunI |
| P1-R | CAGATCGTCTGATGATGTTGC | |
| P2-F | GCAATGGCTGTTGTCCGAAT | CAPS, Cfr10I |
| P2-R | CTATGACGTTTGCTTTGTGCC | |
| P3-F | CTCCTTCGCAGACTCTACAC | CAPS, Eco52I |
| P3-R | ATGTCAATCTCTGATATCGGC | |
| P4-F | GCGAGCACATAAGTCCTCTA | dCAPS, AluI |
| P4-R | ATAATTGTTTAAAGGTGTCAG | |
| P5-F | AGGCGCAGTAAAAACACCTG | SSR |
| P5-R | CTTGCGTGGTTTCAAGGG | |
| P6-F | CATTAGGCGGAGATGGCAAT | InDel |
| P6-R | ATAGCCAACACTCATCACTGTCG | |
| P7-F | AAGGAGATGCAGAGAGGGTTTAC | InDel |
| P7-R | AGGAAGGATAGGTGTTTGATGAAC | |
| P8-F | TCAGATGACTTAGCAACACAAGC | CAPS, DraI |
| P8-R | CTTGCTTATCCCAAATGTCGT | |
| P9-F | AGGAAACGATAGGCGAACAAAC | CAPS, EcoRV |
| P9-R | ACAAGGCTTCCAAACTTCCAA | |
| P10-F | CACGACCTTACTTATGAGCATG | SSR |
| P10-R | AAAAGAACACAGCAGGGGAG | |
| P11-F | GTCCCTCATCTTTAGGCTGTG | SSR |
| P11-R | GCCTAAAGAGGAGGGACGAA | |
| Fssr-F | TTAGTGCGTGTGGCATAGATG | SSR |
| Fssr-R | GGCCTTTTTGTGAATTGGG | |
| Vector construction | ||
| 58S-C-F | ATGAAGGACCGAGAAGAAGC | 58S-C |
| 58S-C-R | GTTCTCAGATGATATGGAACTGTG | |
| dsi-F | TCGACTAGTTGGCAGGGTACCTGTACATGCCCAACAAGCTCT | dsi |
| dsi-R | GGCGAGCTCGGATCCTGTTCGCATGGACAATTGGTG | |
| OX-1F | TATGGTACCGACTACATGGGCACCCCTTGAA | 35S:S, Ubi:S |
| OX-1R | TATGGATCCCGTGATTCAGCAGGTGGAGTTAA | |
| OX-2F | TCAGAGCTCGCATCAGGAAAGAAGCTTCTACTA | 35S:S-CS |
| OX-2R | TGACCTGCAGTACTTCAGTACCATCAGCGTGAC | |
| OX-3F | TATGGTACCAATTGTCCATGCGAACAGAAAA | Ubi:S P6 |
| OX-3R | TATGGATCCCCGTAAACAATTATCGGTGATA | |
| ORF1G-R | CATTAGGCGGAGATGGCAAT | 58S-ORF1+G |
| ORF1G-muF | CAAAATCACAATAAAGATATATGGATCAAAACCTTAATAAT | |
| ORF1G-muR | ATTATTAAGGTTTTGATCCATATATCTTTATTGTGATTTTG | |
| ORF1G-F | AGGTGTCGGTTCTAATGGTAGAAC | |
| ORF2G-F | CCATTTATAGGCTACTCCTTTCC | 58S-ORF2+G |
| ORF2G-muR | AACTAGTATATAGTATATAGAGAAGCCCAAGTACCGAACTTTTTCTGTTCGCCAT | |
| ORF3G-R | ATTGTTGCAGGTGAAGGTGAGC | 58S-ORF3+G |
| ORF3G-muF | CCCATTGCCATCTCCGCCTAATGGAACGCCTTGCATGTTGG | |
| ORF3G-muR | CCAACATGCAAGGCGTTCCATTAGGCGGAGATGGCAATGGG | |
| ORF3G-F | CAATTTTGCCTGGTATCACCAA | |
| Positive test | ||
| PMCGF | GGCTCACCAAACCTTAAACAA | |
| PMCGR | CTGAGCTACACATGCTCAGGTT | |
| GUS1.6F | CCAGGCAGTTTTAACGATCAGTTCGC | |
| GUS1.6R | GAGTGAAGATCCCTTTCTTGTTACCG | |
| P6-F2 | AATTGTCCATGCGAACAGAAAA | |
| P6-R2 | CCGTAAACAATTATCGGTGATA | |
| RACE | ||
| RACE5-1 | CTGATGACTGTGTTCCAGTATTTG | 5′-RACE |
| RACE5-2 | ACGCAAGCTTGGCTCTTTGTT | 5′-RACE |
| RACE5-3 | ACCTGGCATAGACCGATAGTTAC | 5′ RLM-RACE |
| RACE5-4 | CTGATGACTGTGTTCCAGTATTTG | 5′ RLM-RACE |
| RACE3-1 | CAATTTTGCCTGGTATCACCAA | 3′-RACE |
| RACE3-2 | CAACATCATTAGGTTGCTGTGAT | 3′-RACE |
| qPCR | ||
| RT-F | AAAGTTCGGTACTTGGGCTTCTCT | |
| RT-R | ACTCCCATTCGATATTGTTGCAAGGGC | |
| UBQ-F | AACCAGCTGAGGCCCAAGA | |
| UBQ-R | ACGATTGATTTAACCAGTCCATGA | |
CAPS, cleaved amplified polymorphic sequences marker; dCAPS, derived cleaved amplified polymorphic sequences marker; InDel, insertion/deletion marker; SSR, simple sequence repeat marker.