Table 1.
Characterization of the TEM mutations selected against BLIP
Mutant | Kind | konmut/konwt* | koff† × 10−4 s−1 | KD‡ × 10−10 M | Tm,§ °C | Enzymatic activity¶ |
WT | 1.0 | 0.85 | 2.8 | 55 | 0.0023 | |
T29E | Buried | 0.6 | 47.6 | 0.0019 | ||
K111Q | Interface | 0.7 | 57.6 | 0.0025 | ||
K111M | Interface | 0.9 | 55.7 | 0.0016 | ||
K111N | Interface | 0.9 | 1.5 | 3.8 | 54.3 | 0.0014 |
S82T | Surface | 1.0 | 53.4 | 0.0017 | ||
P62L | Surface | 1.0 | 53.2 | 0.0019 | ||
H153R | Surface | 1.0 | 58 | 0.0017 | ||
V108L | Interface | 1.0 | 54.4 | 0.0015 | ||
R240Y | Interface | 1.1 | 1 | 2.2 | 55 | 0.0027 |
M270L | Interface | 1.2 | 56.4 | 0.0023 | ||
D50L | Surface | 1.2 | 55 | 0.0015 | ||
N100Y | Interface | 1.3 | 52 | 0.0028 | ||
P107Q | Interface | 1.3 | 3.3 | 6.1 | 54.3 | 0.0017 |
D252K | Surface | 1.4 | 50.8 | 0.0025 | ||
Q99R | Interface | 1.6 | 54.4 | 0.0019 | ||
E168G | Interface | 1.6 | 1 | 2.1 | 55.8 | 0.0014 |
D252S | Surface | 1.6 | 54.1 | 0.0012 | ||
K111R | Interface | 1.9 | 55.8 | 0.0012 | ||
E110V | Interface | 2.3 | 0.9 | 0.9 | 55.5 | 0.0016 |
E110G | Interface | 3.3 | 0.5 | 0.6 | 56.4 | 0.0018 |
E171K | Interface | 3.4 | 0.9 | 1.0 | 54 | 0.001 |
E110G E168G | 3.6 | 1 | 1.0 | 54.6 | 0.0011 | |
E110V E168G | 3.7 | 0.8 | 0.8 | 51 | 0.0015 | |
E239K | Interface | 5.0 | 1.6 | 1.4 | 51.2 | 0.0019 |
E239R | Interface | 5.2 | 56 | 0.0011 |
Stopped-flow measurements as described in Methods. The values are relative to WT (3 × 105 M−1⋅s−1). SE for kon values is 20%, and for konmut/konwt is 30% (see Methods for details).
From SPR measurements done at six different concentrations. SE is 25%.
KD = koff/kon, with koff values taken from SPR and kon from stopped-flow measurements. SE is 30%.
Protein thermal stability. SE is 1 °C.
Enzymatic activity was determined as the initial slope of CENTA catalysis using 5 nM enzyme and 375 µM substrate. SE is 30%.