Table 1.
Name | Sequence (5′–3′) | Amplicon length | Gene (mutation*) | References |
---|---|---|---|---|
BpsID_137F | GCAGATGAGGCGGATGATAG | 137/112 bp** | BC1G_07159/Bcin09g02270 | Plesken et al., 2015a |
BpsID_273R | TCCACCCAAGCATCATCTTC | |||
BcinN-in-F | GCGACCTCATCGTTCTTTCAC | 182 bp | mrr1 | Plesken et al., 2015a |
BcinN-in-R | GGCTCTCGATGAGCTGTTTC | |||
Mrr1-spez-F | TATCGGTCTTGCAGTCCGC | 141 bp | mrr1 | Leroch et al., 2013 |
Mrr1-spez-R | TTCCGTACCCCGATCTTCGGAA | |||
erg27F412SP745F | GTGTTGGTATTTATCTACAGATTGATAT | 125 bp | erg27 (F412S*1) | This work |
erg27_1410R | ACATCGTCGGGAGATAATGC | |||
Seq_erg27_fw | GTACCGCCACTTATTCCG | 950 bp | erg27 (F412I) | This work |
Seq_erg27_rev | GCGTTCTTTCCCACTAGC | |||
Seq_erg27_I63 | CAGGCGCAAACAGGTGATAC | 1425 bp | erg27 (T63I) | This work |
Seq_erg27_rev | GCGTTCTTTCCCACTAGC | |||
Qo13ext | GGTATAACCCGACGGGGTTATAGAATAG | 560 bp*** | cytB (G143A*2) | Samuel et al., 2011 |
Qo14ext | AACCATCTCCATCCACCATACCTACAAA | |||
H272R-fw | GGCAGCTTTGGATAACAGCATGAGTTTGTACAGATGGC | 120 bp | sdhB (H272R*3) | Veloukas et al., 2011 |
H272-univ-rev | GCCATTTCCTTCTTAATCTCCGC | |||
H272Y-fwfw | GGCAGCTTTGGATAACAGCATGAGTTTGTACAGATAT | 120 bp | sdhB (H272Y*4) | Veloukas et al., 2011 |
H272-univ-rev | GCCATTTCCTTCTTAATCTCCGC | |||
Mrr1_spez_F | TATCGGTCTTGCAGTCCGC | 442 bp | mrr1 (ΔL497*5) | Leroch et al., 2013 |
Mrr1-Pira | CCACCACAATCTTGGATCATTGGGATCAGAACCTGC | |||
PIRA-Tub1 | GCCTCGTTATCGATACAGAAGATC | 132 bp | tubA (E198A*6) | Plesken et al., 2015a |
PIRA-Tub2 | TATGATGGCTACCTTCTCCGTC | |||
BF2 | CAACGTTATGGCACAAAATCTCA | 849 bp | bos1 | Ma et al., 2007 |
BR2 | AAGTTTCTGGCCATGGTGTTCA |
Fungicide resistance mutation detected.
Amplicon sizes for B. cinerea and B. pseudocinerea, respectively.
Amplicon size if no intron is present.
The following enzymes were used for digestion of the PCR fragments to detect the indicated mutation:
EcoRV;
SatI;
HhaI;
EcoRV;
HpyCH4V;
BglII.