Table 6. Recommendations for actionable pharmacogenomic markers based on CPIC guidelines.
Gene | Actionable SNP | MAF | Clinical Pharmacogenetics Implementation Consortium | ||
---|---|---|---|---|---|
Evidence level | Drug | Dosing guidelines | |||
CYP2C9 | rs1799853 | 0.015 | 1A | Warfarin | Pharmacogenetic algorithm-based dosing available on http://www.warfarindosing.org is used for patients with different combinations of CYP2C9 and VKORC1 genotypes. |
rs1057910 | 0.072 | 1A | |||
VKORC1 | rs9923231 | 0.597 | 1A | ||
CYP2C19 | rs4244285 | 0.342 | 1A | Clopidogrel, Amitriptyline | An alternative antiplatelet therapy to clopidogrel is recommended for CYP2C19 poor or intermediate metabolizers. |
rs4986893 | 0.025 | 1A | |||
rs72552267 | 0.002 | 1A | An alternative drug to amitriptyline is recommended for CYP2C19 ultrarapid metabolizers. | ||
rs12248560 | 0.062 | 1A | |||
CYP2D6 | rs16947 | 0.207 | 1A | Codeine, Amitriptyline, Nortiptyline | Alternate analgesics to codeine are recommended for CYP2D6 ultrarapid and poor metabolizers due to potential toxicity and lack of efficacy, respectively. |
rs1135840 | 0.617 | 1A | |||
rs1080985 | 0.146 | 1A | Alternative drugs to amitriptyline and nortriptyline are recommended for CYP2D6 ultrarapid metabolizers and poor metabolizers. | ||
rs3892097 | 0.040 | 1A | |||
rs1065852 | 0.411 | 1A | |||
rs28371725 | 0.069 | 1A | |||
CYP3A5 | rs776746 | 0.653 | 1A | Tacrolimus | Increasing the starting dose by 1.5 to 2 times is recommended for CYP3A5 intermediate or extensive metabolizers. |
SNP, single-nucleotide polymorphism; MAF, minor allele frequency.