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. 2004 Sep;70(9):5651–5658. doi: 10.1128/AEM.70.9.5651-5658.2004

TABLE 2.

Amino acid identities of partial chlorite dismutase protein sequences

Source or organism and ID no.a % Amino acid identity with sample no:
1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19
1. D. agitata 74.8 76.4 64.2 78.9 65.0 63.4 64.2 62.6 69.1 68.3 64.2 74.0 74.8 73.2 72.4 73.2 69.1 69.9
2. M. magneto 74.8 80.5 65.9 77.2 66.7 65.0 65.9 64.2 81.3 82.1 65.9 82.1 81.3 79.7 78.9 79.7 82.9 82.9
3. I. dechloratans 76.4 80.5 64.2 78.9 65.0 63.4 63.4 63.4 72.4 72.4 64.2 71.5 72.4 70.7 69.9 70.7 72.4 73.2
4. “D. aromatica” 64.2 65.9 64.2 64.2 98.4 98.4 97.6 95.9 66.7 65.9 100 65.9 66.7 65.9 64.2 65.0 66.7 67.5
5. Dcm. strain LT1 78.9 77.2 78.9 64.2 65.0 63.4 64.2 62.6 73.2 73.2 64.2 77.2 78.0 76.4 76.4 77.2 73.2 74.0
6. Pseud. strain PK 65.0 66.7 65.0 98.4 65.0 98.4 95.9 95.1 68.3 66.7 98.4 66.7 67.5 65.9 65.0 65.9 68.3 69.1
7. “D. chlorophilus” 63.4 65.0 63.4 98.4 63.4 98.4 95.9 95.1 66.7 65.0 98.4 65.0 65.9 65.0 63.4 64.2 66.7 67.5
8. D. suillum 64.2 65.9 63.4 97.6 64.2 95.9 95.9 95.1 66.7 65.9 97.6 65.9 66.7 65.9 64.2 65.0 66.7 67.5
9. Strain CR 62.6 64.2 63.4 95.9 62.6 95.1 95.1 95.1 65.0 64.2 95.9 64.2 65.0 64.2 62.6 63.4 65.0 65.9
10. “D. anomalous” 69.1 81.3 72.4 66.7 73.2 68.3 66.7 66.7 65.0 95.9 66.7 82.9 83.7 82.1 81.3 82.1 97.6 98.4
11. Dsp. strain DB 68.3 82.1 72.4 65.9 73.2 66.7 65.0 65.9 64.2 95.9 65.9 82.9 83.7 82.1 81.3 82.1 96.7 97.6
12. Los Alamos well 3 64.2 65.9 64.2 100 64.2 98.4 98.4 97.6 95.9 66.7 65.9 65.9 66.7 65.9 64.2 65.0 66.7 67.5
13. Los Alamos well 4 74.0 82.1 71.5 65.9 77.2 66.7 65.0 65.9 64.2 82.9 82.9 65.9 99.2 97.6 96.7 96.7 83.7 83.7
14. Lake Hoare 12m-A 74.8 81.3 72.4 66.7 78.0 67.5 65.9 66.7 65.0 83.7 83.7 66.7 99.2 98.4 97.6 97.6 83.7 84.6
15. Lake Hoare 12m-B 73.2 79.7 70.7 65.9 76.4 65.9 65.0 65.9 64.2 82.1 82.1 65.9 97.6 98.4 95.9 95.9 82.1 82.9
16. Lake Fryxell sed-A 72.4 78.9 69.9 64.2 76.4 65.0 63.4 64.2 62.6 81.3 81.3 64.2 96.7 97.6 95.9 98.4 81.3 82.1
17. Lake Fryxell sed-B 73.2 79.7 70.7 65.0 77.2 65.9 64.2 65.0 63.4 82.1 82.1 65.0 96.7 97.6 95.9 98.4 82.1 82.9
18. Vida-A 69.1 82.9 72.4 66.7 73.2 68.3 66.7 66.7 65.0 97.6 96.7 66.7 83.7 83.7 82.1 81.3 82.1 99.2
19. Vida-B 69.9 82.9 73.2 67.5 74.0 69.1 67.5 67.5 65.9 98.4 97.6 67.5 83.7 84.6 82.9 82.1 82.9 99.2
a

ID no., identification no. for sample (numbers correspond to numbers in column heads); Dcm. strain LT1, Dechloromonas sp. strain LT1; Pseud. strain PK, Pseudomonas sp. strain PK; Dsp. strain DB, Dechlorospirillum sp. strain DB; Lake Hoare 12m-A and 12m-B, clones A and B from 12-m water column of Lake Hoare; Lake Fryxell sed-A and sed-B, clones A and B from Lake Fryxell sediment; Vida-A and Vida-B, clones A and B from Vida.