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. 2004 Sep;70(9):5522–5527. doi: 10.1128/AEM.70.9.5522-5527.2004

TABLE 1.

Reeves signature model and associated predicted substrates for metagenomic AT domainsa

Substrate or AT domain Conserved pattern sequences Predicted substrate(s)
Substratesb
    M (Q/R/D/E)TX(Y/F) (T/A)Q GHS(L/V/I)GE H(A/G)FH
    mM R(V/A/I)(D/E)VVQ GHS(Q/M)GE YASH
    eM RVDVV(Q/H) GHSQGE TAGH
AT domains
    Lib4 RTEIAQ GHSVGE YAFH M, mM
    Lib7 ETIYTQ GHSIGE RAFH M
    Lib10 APSVGL GHSMGE VAAH M, mM
a

Reeves signature model (23). The consensus patterns for malonyl, methylmalonyl, and ethylmalonyl are given with all possibilities (indicated in parentheses). Signatures of the metagenomic AT domains were extracted and reported with the deduced substrate(s).

b

M, malonyl; mM, methylmalonyl; eM, ethylmalonyl.