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. Author manuscript; available in PMC: 2017 Nov 1.
Published in final edited form as: J Comput Aided Mol Des. 2016 Sep 27;30(11):927–944. doi: 10.1007/s10822-016-9954-8

Table 4.

Shown are the results for error analysis on our reference calculations which estimated log D as a cyclohexane partition coefficient (log P) and the correction to distributions coefficients by pKa ( logDpKa) and by state penalty (log Dstate penalty). Included here are average error (AveErr), root-mean-squared error (RMSE), average unsigned error (AUE), Kendall’s tau, and Pearson’s R.

Metric log P
logDpKa
log Dstate penalty

AveErr 1.6 ± 0.3 0.7 ± 0.3 0.5 ± 0.4
RMSE 2.6 ± 0.2 2.4 ± 0.2 2.6 ± 0.3
AUE 2.1 ± 0.2 2.0 ± 0.2 2.1 ± 0.2
tau 0.49 ± 0.08 0.65 ± 0.07 0.65 ± 0.06
R 0.6 ± 0.1 0.78 ± 0.07 0.77 ± 0.06