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. 2017 Jan 4;7:2064. doi: 10.3389/fmicb.2016.02064

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Copyright © 2017 Lupatini, Korthals, de Hollander, Janssens and Kuramae.

This is an open-access article distributed under the terms of the Creative Commons Attribution License (CC BY). The use, distribution or reproduction in other forums is permitted, provided the original author(s) or licensor are credited and that the original publication in this journal is cited, in accordance with accepted academic practice. No use, distribution or reproduction is permitted which does not comply with these terms.

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Dendrogram showing the taxonomy and the habitat specialists associated with soil health treatments (AD, anaerobic soil disinfestation; CC, chemical control; CL, caliente control; CH, chitin; CB, combination; CO, compost; CT, control treatment; GC, grass-clover; MA, Marigold; PH, physical control). Only the strict specialist OTUs – cut-off 97% – (9.2% of the total OTU data) with statistical significance of the association (P < 0.05, P < 0.01, and P < 0.001) were considered. The taxonomic affiliation at class level of different Phyla of each specialist OTU is identified by the colors range in the below panel and within the tree. The habits preference for a given OTU is indicated in circles outside of the tree. The SHTs within farming systems (conventional is represented by blue and organic by green colors). The diameter of the circles represents the relative abundance (square-root transformed) of the species. Detailed information on abundance of each OTU is provided in Supplementary Material 2.