TABLE 1 .
Range of the fold changes in expression of the biosynthetic genes contained in the BGCs predicted by antiSMASH in the genomes of Vibrio coralliilyticus S2052 and Photobacterium galatheae S2753
Strain | Cluster | Type of BGC | Range of FCs in expression of biosynthetic genes | Time pointa |
---|---|---|---|---|
V. coralliilyticus S2052 | 1 | T3PKS | X | X |
2 | NRPS | 2, 3.8 | Stat | |
3 | Arylpolyene-NRPS (andrimid) | 2.6, 6.8 | Exp | |
4 | NRPS-T1PKS | −3, −18 | Stat | |
5 | NRPS-T1PKS | −4.8, −7.6 | Stat | |
6 | Ectoine | −2.2, 2.5 | Stat | |
P. galatheae S2753 | 1 | Other | X | X |
2 | NRPS | X | X | |
3 | Other | X | X | |
5 | NRPS-T1PKS | 2.2, 3 | Exp | |
6 | NRPS | 34.6 | Stat | |
7 | Siderophore | X | X | |
8 | T1PKS | X | X | |
9 | Other | 2.3, 3.4 | Stat | |
10 | Ectoine | 9 | Stat | |
11 | NRPS (holomycin) | 5, 10 | Stat |
The time point at which the up- or downregulation was observed is indicated. Exp, time point in the exponential growth phase; Stat, time point in the stationary growth phase; X, not differentially expressed.