Table 1. Source, Reads and OTU Counts of Fecal samples from Giant Pandas that Became Naturally Infected with CDV and healthy controls.
ID number | DOB† | DOI‡ | DOO¶ | DOD§ | Sex | Sample Name | Collection Date | CDV status | Number of Reads | Number of OTUs |
---|---|---|---|---|---|---|---|---|---|---|
GP-603 | 08/2005 | 05/01/2015 | 10/01/2015 | 23/01/2015 | F | CDV1.T1 | 05/01/2015 | positive | 29,627 | 75 |
CDV1.T2 | 11/01/2015 | positive | 37,560 | 41 | ||||||
CDV1.T3 | 17/01/2015 | positive | 38,141 | 51 | ||||||
CDV1.T4 | 23/01/2015 | positive | 36,204 | 71 | ||||||
GP-754 | 08/2009 | 26/12/2014 | 02/01/2015 | 04/02/2015 | F | CDV2.T1 | 26/12/2014 | positive | 35,520 | 58 |
CDV2.T2 | 23/01/2015 | positive | 39,425 | 26 | ||||||
CDV2.T3 | 31/01/2015 | positive | 38,012 | 54 | ||||||
CDV2.T4 | 04/02/2015 | positive | 36,368 | 90 | ||||||
GP-700 | /2006 | 24/12/2014 | 24/12/2014 | 04/01/2015 | F | CDV3 | 02/01/2015 | positive | 31,710 | 37 |
GP-753 | 08/2009 | 24/12/2014 | 14/03/2015 | 08/04/2015 | M | CDV4 | 30/03/2015 | positive | 37,195 | 30 |
GP-757 | 09/2009 | * | * | * | F | Control.1 | 23/01/2015 | negative | 37,586 | 60 |
GP-500 | 1985 | * | * | * | F | Control.2 | 23/01/2015 | negative | 34,396 | 66 |
GP-908 | 18/07/2013 | * | * | * | F | Control.3 | 23/01/2015 | negative | 37,091 | 78 |
GP-803 | 2004 ± 5 | * | * | * | M | Control.4 | 23/01/2015 | negative | 33,157 | 49 |
GP-753 | 18/08/2009 | * | * | * | M | Control.5 | 23/01/2015 | negative | 38,188 | 53 |
GP-509 | 06/08/2000 | * | * | * | F | Control.6 | 23/01/2015 | negative | 36,039 | 51 |
†Dates of birth.
‡Dates of infection. Asterisks denote giant pandas that are presently CDV-negative.
¶Dates of onset. Asterisks denote giant pandas that are presently CDV-negative.
§Dates of death. Asterisks denote giant pandas that are presently alive.