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Predicted RDDs for each treatment of HEK-293 cells. Fraction of A→G RNA editing sites is provided in parenthesis
| gDNA vs. treatment | |||
|---|---|---|---|
| Variant caller | untreated | siADAR | siAPOBEC3 |
| SAMtools/BCFtools | 11,191 (93.3%) | 2117 (68.9%) | 6423 (92%) |
| MuTect | 7605 (92.5%) | 1793 (69.4%) | 4181 (90.2%) |
| REDItools | 11,900 (90.1%) | 2729 (59.7%) | 6985 (88.6%) |
| JACUSA | 15,461 (92.2%) | 3371 (68.3%) | 8722 (91.2%) |
