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. 2016 Nov 29;45(Database issue):D236–D242. doi: 10.1093/nar/gkw1053

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© The Author(s) 2016. Published by Oxford University Press on behalf of Nucleic Acids Research.

This is an Open Access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by-nc/4.0/), which permits non-commercial re-use, distribution, and reproduction in any medium, provided the original work is properly cited. For commercial re-use, please contact journals.permissions@oup.com

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Figure 2. — Example of online JET2 Viewer display. On top, the 3D interactive JSmol plugin shows the site predicted by SC3 for chain B of the PDB entry 9ATC. The two chains, A and B, are displayed as transparent gray cartoons. At the bottom, the sites predicted for chain A with scoring schemes SC1 (orange), SC2 (purple) and SC3 (cyan) are displayed. Each interface is oriented toward the user, and plotted (solid surface) with the other two (transparent). T_JET, PC and 1-CV values are also shown for each residue of the protein. Different colors, ranging from red (high) to blue (low), are used to highlight the level of the property for the residue.