Table 2. JET2 performance on more than 15 000 interacting sites.
# chains | Sen | PPV | Spe | Acc | |
---|---|---|---|---|---|
All | 10 900 | 52.52 | 51.24 | 80.05 | 75.89 |
x < 100 | 1 548 | 75.73 | 52.83 | 47.48 | 60.23 |
100 ≤ x < 200 | 3 747 | 57.44 | 48.02 | 77.21 | 71.63 |
200 ≤ x < 300 | 2 630 | 45.95 | 49.73 | 89.81 | 81.76 |
300 ≤ x < 500 | 2 413 | 39.57 | 55.24 | 94.24 | 86.24 |
x ≥ 500 | 562 | 42.44 | 59.79 | 79.69 | 74.34 |
Statistical performance values averaged over 15 071 predicted interacting sites are given in percentages. iJET2 predictions were obtained from a consensus of 2 runs out of 10. For all interacting sites, the three scoring schemes were systematically used and the best patch or combination of patches was retained. x represents the size (number of residues) of the protein considered.