Table 1. The growth of data hosted by the R-loopDB since the initial release.
Initial release in 2012 | Up-to-date in 2016 | |
---|---|---|
Gene annotation system | UCSC known genes | Ensembl build 75 |
No. of organisms | 1 species | 8 species |
No. of transcript IDs | 39 720 | 286 584 |
No. of gene IDs | 14 954 | 121 056 |
No. of RLFSs in the human genes | 245 181 | 511 651 |
No. of RLFS-merged regions in the human genes | 140 106 | 169 222 |
No. of RLFSs in genes | 245 181 | 1 565 795 |
No. of RLFS-merged regions in genes | 140 106 | 565 789 |
Remark: the initial release database provides RLFSs only in genic regions, where the updated database provides RLFSs in genic regions and 2 kb up/downstream region of genes.