Table 1. Increase in BioGRID data content since previous update.
August 2014 (3.2.115) | September 2016 (3.4.140) | ||||||
---|---|---|---|---|---|---|---|
Organism | Type | Nodes | Edges | Publications | Nodes | Edges | Publications |
Arabidopsis thaliana | PI | 7200 | 21 536 | 1414 | 9479 | 41 918 | 2168 |
GI | 112 | 192 | 66 | 246 | 298 | 125 | |
Caenorhabditis elegans | PI | 3288 | 6345 | 178 | 3277 | 6341 | 190 |
GI | 1129 | 2344 | 30 | 1123 | 2330 | 31 | |
Drosophila melanogaster | PI | 8076 | 37 606 | 416 | 8236 | 38 638 | 454 |
GI | 1042 | 9980 | 1483 | 1042 | 9979 | 1482 | |
Escherichia coli | PI | 105 | 102 | 14 | 108 | 109 | 17 |
GI | 34 | 25 | 11 | 4000 | 166 137 | 15 | |
Homo sapiens | PI | 18 435 | 237 498 | 23 388 | 20 914 | 365 547 | 25 383 |
GI | 1364 | 1678 | 273 | 1577 | 1663 | 283 | |
Mus musculus | PI | 8276 | 22 563 | 3207 | 11 892 | 38 163 | 3529 |
GI | 259 | 290 | 167 | 275 | 309 | 176 | |
Saccharomyces cerevisiae | PI | 6410 | 135 690 | 7402 | 6299 | 131 659 | 8074 |
GI | 5674 | 207 188 | 7257 | 5719 | 212 092 | 7880 | |
Schizosaccharomyces pombe | PI | 2694 | 11 270 | 1146 | 2946 | 12 817 | 1247 |
GI | 3158 | 56 745 | 1359 | 3208 | 57 847 | 1459 | |
Other organisms | ALL | 7999 | 12 367 | 1920 | 9688 | 14 814 | 2250 |
Total | ALL | 55 528 | 749 912 | 43 149 | 65 031 | 1 072 173 | 47 223 |
Data drawn from monthly release 3.2.115 and 3.4.140 of BioGRID. Nodes refer to genes or proteins, edges refer to interactions. PI, protein (physical) interactions; GI, genetic interactions. All numbers represent total interactions curated.