Table 1. Coverage of version 11.1 PANTHER GO-slim functional annotations for selected genomes.
| Organism | Total number of genes in genome | Total number of genes annotated | Total number of annotations | Total number of genes with new annotations from GO Phylo-project | Total number of new annotations from GO Phylo-project |
|---|---|---|---|---|---|
| Human | 20 972 | 13 387 | 57 271 | 5925 | 28 996 |
| Mouse | 22 322 | 14 331 | 61 828 | 6804 | 33 318 |
| Rat | 23 781 | 15 536 | 67 112 | 7642 | 37 378 |
| Pig | 21 398 | 13 469 | 58 475 | 6266 | 31 080 |
| Dog | 19 692 | 12 715 | 54 307 | 5727 | 27 629 |
| Chicken | 15 789 | 10 056 | 43 605 | 4114 | 20 524 |
| Zebrafish | 27 187 | 17 113 | 73 161 | 6904 | 33 578 |
| Fruit fly (D. melanogaster) | 14 217 | 6942 | 26 408 | 3128 | 13 452 |
| Nematode (C. elegans) | 20 472 | 8308 | 31 072 | 3781 | 16 052 |
| Slime mold (D. discoideum) | 13 044 | 5133 | 19 582 | 2267 | 10 121 |
| Budding yeast (S. cerevisiae) | 6728 | 3372 | 13 364 | 1796 | 8363 |
| Fission yeast (S. pombe) | 5140 | 3110 | 12 306 | 1610 | 7533 |
| C. albicans, fungus | 9329 | 3489 | 13 455 | 1780 | 8146 |
| A. thaliana, plant | 27 352 | 12 130 | 44 243 | 6119 | 24 204 |
| Rice | 62 904 | 17 873 | 61 811 | 9307 | 34 673 |
| Tomato | 34 783 | 13 630 | 48 464 | 6820 | 26 737 |
| E. coli | 4262 | 1990 | 6267 | 705 | 2249 |
| B. subtilis | 4199 | 1702 | 5452 | 546 | 1733 |
The total number of genes with at least one functional annotation (across molecular function, biological process and cellular component aspects) is listed, followed by the number of genes/annotations added by the GO Phylogenetic Annotation project. Detailed statistics, such as coverage of each aspect, for all genomes in PANTHER can be found at http://pantherdb.org/panther/summaryStats.jsp.