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. 2016 Sep 1;45(Database issue):D750–D757. doi: 10.1093/nar/gkw767

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© The Author(s) 2016. Published by Oxford University Press on behalf of Nucleic Acids Research.

This is an Open Access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by-nc/4.0/), which permits non-commercial re-use, distribution, and reproduction in any medium, provided the original work is properly cited. For commercial re-use, please contact journals.permissions@oup.com

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Figure 3. — Query and retrieval in REDIportal. Editing sites can be searched entering genome coordinates or gene symbols in combination with additional filters. In figure we show a query for editing positions occurring in non-repetitive elements (NONREP) of BLCAP gene. A-to-I sites found in REDIportal are displayed in a dynamic table with a variety of extra information such as: (i) a link to UCSC genome browser; (ii) the genomic position; (iii) the reference and edited nucleotide; (iv) the strand; (v) the dbSNP accession (if any); (vi) the editing location; (vii) the repeated element (if any); (viii) the gene symbol according to Gencode v19; (ix) the genic region; (x) the number of edited samples; (xi) the potential amino acid change; (xii) the PhastCons conservation score across 46 organisms; and (xi) a flag indicating in which database (ATLAS, RADAR or DARNED) is reported.