Table 1. Average r2 values and marker distances.
| Average r2 values (No. of marker pairs)
|
|||||
|---|---|---|---|---|---|
| Data | Recombination frequency* | Frequency† | KY01au | KY02sp | |
| Second chromosome | All | 0.129 (0.06) | 0.0048 (1,924) | 0.0081 (1,898) | |
| R | 0.132 (0.05) | 0.21 | 0.0049 (1,163) | 0.0084 (1,162) | |
| S | 0.117 (0.10) | 0.24 | 0.0046 (90) | 0.0059 (84) | |
| Third chromosome | All | 0.118 (0.05) | 0.0044 (715) | 0.0064 (715) | |
| R | 0.121 (0.04) | 0.26 | 0.0047 (340) | 0.0071 (340) | |
| S | 0.098 (0.05) | 0.30 | 0.0041 (63) | 0.0045 (63) | |
R and S indicate replacement and silent polymorphisms, respectively. Very closely linked marker pairs are excluded from the analysis. See Materials and Methods for calculation of recombination frequency.
Average recombination frequency between markers. Fraction of marker pairs of 1% or less recombination frequency is given in parentheses.
Average frequency of less common alleles.