Table 5.
Enzymes and proteins associated with gene specific regulatory regions containing single nucleotide polymorphisms
| Enzymes/Proteins | Promoter | Open chromatin sites | Promoter flanking region | CTCF/TF binding site | Enhancer |
|---|---|---|---|---|---|
| H3K36me3 | Aadat | Slc1a3, Got1, Grik4 | Gclc, Got1 | Slc1a3, Eprs, Gclc | Gclc |
| JUN | Slc1a3 | ||||
| DNase1 | Slc1a3, Aadat | Slc1a3, Got1, Grik4 | Gclc, Got1, Grik4 | Slc1a3, Grm2, Eprs, Aadat, Gclc, Grik4 | Gclc |
| H3K4me3 | Slc1a3, Aadat | ||||
| H3K27ac | Slc1a3, Aadat | Got1, Grik4 | Gclc, Got1, Grik4 | Slc1a3, Aadat, Gclc | Gclc |
| SIN3A | Slc1a3 | Slc1a3 | |||
| MXI1 | Slc1a3 | Slc1a3 | |||
| BHLHE40 | Slc1a3 | Slc1a3, Grm2 | |||
| MYC | Slc1a3 | Slc1a3 | |||
| NELFe | Slc1a3 | Slc1a3 | |||
| Max | Slc1a3 | Slc1a3 | |||
| ZMIZ1 | Slc1a3 | Slc1a3 | |||
| H3K9ac | Slc1a3, Aadat | Got1, Grik4 | Gclc, Got1 | Slc1a3, Aadat, Gclc | |
| PolII | Slc1a3, Aadat | Slc1a3, Aadat | |||
| ZNF384 | Slc1a3 | ||||
| TCF12 | Grm2 | ||||
| SMC3 | Aadat | Gclc | Grm2, Aadat, Gclc, Grik4 | ||
| Rad21 | Aadat | Gclc | Grm2, Aadat, Gclc, Grik4 | ||
| H3K4me1 | Grik4 | Grik4 | |||
| MAZ | Grik4 | ||||
| H3K27me3 | Grik4 | Grm2, Grik4 |