TABLE 4.
WKYGla versus SHRSPGla NGS sequence variants on RNO3 within the region in-common between congenic strains 3d and 3f
| SNP consequences | INDEL consequences | ||
| INTERGENIC | 1930 | INTERGENIC | 406 |
| UPSTREAM | 808 | UPSTREAM | 171 |
| DOWNSTREAM | 711 | DOWNSTREAM | 134 |
| 3PRIME_UTR | 74 | 3PRIME_UTR | 4 |
| 5PRIME_UTR | 15 | 5PRIME_UTR | 0 |
| INTRONIC | 3946 | INTRONIC | 805 |
| SYNONYMOUS_CODING | 77 | SYNONYMOUS_CODING | 0 |
| NON_SYNONYMOUS_CODING | 33 | NON_SYNONYMOUS_CODING | 2 |
| STOP_GAINED | 0 | FRAMESHIFT_CODING | 1 |
| STOP_LOST | 0 | COMPLEX_INDEL | 0 |
| ESSENTIAL_SPLICE_SITE | 2 | ESSENTIAL_SPLICE_SITE | 0 |
| SPLICE_SITE | 13 | SPLICE_SITE | 1 |
| WITHIN_MATURE_miRNA | 0 | WITHIN_MATURE_miRNA | 0 |
| WITHIN_NON_CODING_GENE | 8 | WITHIN_NON_CODING_GENE | 0 |
NGS, next-generation sequencing; RNO3, rat chromosome 3; SHRSP, stroke-prone spontaneously hypertensive; SNP, single-nucleotide polymorphism; WKY, Wistar–Kyoto.