Table 2.
The top 20 upregulated lncRNAs.
| Seq. name | Source | Fold change | Chrom. | Strad. | txStrat | txEnd | Associated gene name |
|---|---|---|---|---|---|---|---|
| NONHSAT120157 | NONCODE v4 | 302.566 | chr7 | − | 37946864 | 37949441 | SFRP4 |
| NONHSAT062994 | NONCODE v4 | 198.76 | chr19 | − | 18896928 | 18897844 | COMP |
| ENST00000424523 | Ensembl | 187.8763 | chr7 | + | 92484223 | 92546465 | |
| NONHSAT016934 | NONCODE v4 | 121.1942 | chr10 | − | 127823937 | 127843874 | ADAM12 |
| NONHSAG007229 | NONCODE v4 | 98.20973 | chr10 | − | 134634754 | 134637851 | TTC40 |
| NONHSAT135001 | NONCODE v4 | 85.73119 | chr9 | + | 131745793 | 131747541 | NUP188 |
| NONHSAT016933 | NONCODE v4 | 66.81899 | chr10 | − | 127779305 | 127798357 | ADAM12 |
| NONHSAT033754 | NONCODE v4 | 59.65379 | chr13 | + | 50191636 | 50192101 | |
| NONHSAT102388 | NONCODE v4 | 57.30576 | chr5 | + | 79377827 | 79379011 | THBS4 |
| NONHSAT016928 | NONCODE v4 | 56.89644 | chr10 | − | 127700956 | 127703336 | ADAM12 |
| NONHSAT076769 | NONCODE v4 | 55.34357 | chr2 | + | 216476099 | 216669548 | LINC00607 |
| NONHSAT033252 | NONCODE v4 | 45.90168 | chr13 | − | 38137358 | 38144948 | POSTN |
| NONHSAG013256 | NONCODE v4 | 45.0158 | chr13 | − | 38136835 | 38145672 | POSTN |
| ENST00000557618 | Ensembl | 40.71083 | chr14 | + | 60981837 | 61021634 | |
| ENST00000597626 | Ensembl | 37.49051 | chr21 | + | 35287852 | 35341659 | |
| NONHSAG030448 | NONCODE v4 | 36.29881 | chr2 | − | 216232403 | 216237205 | FN1 |
| NONHSAT056875 | NONCODE v4 | 34.17572 | chr18 | + | 907552 | 909671 | ADCYAP1 |
| NONHSAG052055 | NONCODE v4 | 32.53344 | chr9 | + | 34084331 | 34096676 | DCAF12 |
| NONHSAT100815 | NONCODE v4 | 31.91256 | chr5 | + | 28524293 | 28602803 | |
| NONHSAT077639 | NONCODE v4 | 30.05823 | chr2 | − | 238241611 | 238243429 | COL6A3 |