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. 2016 Jul 19;35(8-9):449–459. doi: 10.1002/minf.201501038

Table 2.

Occupancies of key interactions in the catalytic cleft of IDO1 from MD simulations.

Complex Pocket A Pocket B
Y126 V130 F163 F164 L234 A264 R231 F226 I354 L384
(4)/2D0T*xray 81 % 86 % 98 % 95 % 62 % 85 %
(4)/2D0T*self 68 % 95 % 98 % 86 % 78 % 97 %
(6)/4PK5xray 91 % 83 % 31 % 71 % 22 % [b] 78 %
(6)/4PK5self 59 % 63 % 89 % 63 % 48 % 66 % 29 % [a] 56 % 75 % 41 %
(7)/4PK6xray 99 % 52 % 97 % 38 % 88 % 95 % 62 % [b] 74 % 32 %
(7)/4PK5cross 98 % 26 % 94 % 40 % 88 % 83 % 57 % [b] 70 % 55 %
(7)/4PK6self 99 % 43 % 98 % 40 % 82 % 94 % 22 % [b] 52 % 94 %

*2D0T including CHES (5) molecules; [a] Hydrogen bond interaction; [b] π‐cation interaction.