Table 4. List of gene modules along with their gene and hub gene memberships under Al stress condition.
SN | Module | G | AO | HG | UHG | Molecular Functions |
---|---|---|---|---|---|---|
1 | Black | 40 | 25 | 11 | 4 | Monooxygenase activity, iron ion binding, heme binding, tetrapyrrole binding, oxidoreductase activity, cation binding ion binding,transition metal ion binding |
2 | Blue | 137 | 68 | 0 | 0 | Protein kinase activity, kinase activity, phosphotransferase activity, alcohol group as acceptor |
3 | Brown | 100 | 68 | 38 | 32 | Iron ion binding, hydrolase activity, acting on ester bonds, metal ion binding, cation binding, ion binding, transcription factor activity, DNA binding, protein kinase activity, phosphotransferase activity, transition metal ion binding, oxidoreductase activity, kinase activity |
4 | Cyan | 29 | 23 | 0 | 0 | Metal ion binding, cation binding, ion binding, transition metal ion binding, nucleic acid binding |
5 | Green | 58 | 32 | 0 | 0 | Protein kinase activity, phosphotransferase activity, protein serine /threonine kinase activity, protein tyrosine kinase activity, kinase activity |
6 | Green-yellow | 33 | 17 | 3 | 3 | Unknown |
7 | Grey | 9 | 4 | 0 | 0 | Unknown |
8 | Grey60 | 21 | 11 | 0 | 0 | Binding |
9 | Light cyan | 23 | 13 | 1 | 1 | Binding |
10 | Light-green | 16 | 11 | 0 | 0 | Catalytic activity |
11 | Magenta | 35 | 16 | 7 | 6 | Hydrolase activity |
12 | Midnight-blue | 24 | 11 | 5 | 3 | Catalytic activity Binding |
13 | Pink | 37 | 18 | 0 | 0 | Nucleotide binding, ATP binding, adenyl ribonucleotide binding, purine nucleoside binding, nucleoside binding, adenyl nucleotide binding |
14 | Purple | 34 | 20 | 0 | 0 | Adenyl ribonucleotide binding adenyl nucleotide binding purine nucleoside binding, nucleoside binding, purine ribonucleotide binding, ribonucleotide binding, nucleotide binding |
15 | Red | 54 | 28 | 20 | 2 | Oxidoreductase activity |
16 | Salmon | 31 | 15 | 0 | 0 | Hydrolase activity, nucleotide binding |
17 | Tan | 31 | 19 | 12 | 8 | Hydrolase activity |
18 | Turquoise | 185 | 106 | 86 | 45 | Primary active transmembrane transporter activity, zinc ion, binding protein kinase activity, ATPase activity, cation transmembrane transporter activity, transition metal ion binding, metal ion binding, active transmembrane transporter activity, phosphotransferase activity, ATPase activity, cation binding, ion binding, ion transmembrane transporter activity, transferase activity, kinase activity |
19 | Yellow | 84 | 49 | 45 | 26 | Oxidoreductase activity |
Total | 981 | 554 | 228 | 130 |
SN: Serial number of module; grey module: genes which do not belong to any module are shown with grey colour; Module: module represented by colours; G: Number of genes belongs to the modules; AO: Number of Arabidopsis orthologs genes belong to each module; HG: Number of hub genes belong to each module; UHG: number of hub genes unique to stress