Table 5. Comparison of proposed and existing approach in terms of predicted hub genes.
| Existing Approach | Proposed Approach | |||||
|---|---|---|---|---|---|---|
| Data sets | # HG | % HG | p value < 1E-5 | p value < 1E-10 | ||
| # HG | % HG | # HG | % HG | |||
| Salinity stress in rice | ||||||
| Rice (Salinity stress) | 214 | 38.49 | 187 | 33.63 | 165 | 29.66 |
| Rice (Control) | 229 | 41.19 | 208 | 37.41 | 180 | 32.36 |
| Al stress in soybean | ||||||
| Soybean (Al stress) | 383 | 39.05 | 331 | 33.74 | 228 | 23.24 |
| Soybean (Control) | 362 | 36.91 | 285 | 29.05 | 187 | 19.14 |
| Cold stress in rice | ||||||
| Rice (Cold stress) | 301 | 46.3 | 265 | 40.7 | 234 | 36 |
| Rice (Control) | 242 | 37.23 | 208 | 32 | 162 | 24.09 |
# HG: Number of hub genes;
% HG: Percentage of hub genes in the gene co-expression network;
Two thresholds for p value are taken as 1E-5 and 1E-10