Table 1.
Summary of obtained transcriptome data
| BSB-1 | BSB-2 | BSB-3 | GC-1 | GC-2 | GC-3 | GB-1 | GB-2 | GB-3 | Total | Merge-sequences | |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Total reads (million) | 55.29 | 23.69 | 21.16 | 51.60 | 23.52 | 21.65 | 55.33 | 23.63 | 23.16 | 299.03 | |
| Total nucleotides (Gb) | 4.98 | 4.79 | 4.27 | 4.64 | 4.75 | 4.37 | 4.98 | 4.77 | 4.68 | 42.23 | |
| Total length (bp) | 40,397,155 | 36,773,931 | 40,344,526 | 117,515,612 | 77,813,385 | ||||||
| N50 length (bp) | 1,499 | 1,181 | 1,330 | 1,616 | |||||||
| Mean length (bp) | 788.70 | 710.65 | 734.73 | 813.08 | |||||||
| NO. assembled sequences (≥100 bp) | 51,220 | 51,747 | 54,911 | 157,878 | 95,702 | ||||||
| NO. assembled sequences (≥1000 bp) | 11,190 (21.85%) | 9,873 (19.08%) | 11,005 (20.04%) | 32,068 | |||||||
| Q20 percentage (%) | 97.1 | 93.88 | 93.78 | 97.9 | 93.57 | 92.49 | 97.04 | 92.35 | 93.16 | ||
| GC percentage (%) | 48.23 | 48.69 | 48.68 | 48.42 | 50.29 | 50.41 | 47.65 | 48.58 | 48.78 | ||