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. 2016 Nov 18;7(1):299–308. doi: 10.1534/g3.116.035741

Table 5. Summary of QTL results for seven traits in soybean A6 × 194D cross.

Trait QTL Chr SNP Marker Nucleotide Position (cM) 1.5 Interval LOD R2 (%) QTL Effect
Palmitic acid q.2p 2 Gm2:7138451 44.58 38–128 5.55 10.49 +0.36%
q.5p 5 Gm5:1420686 2.48 0–8 6.79 13.06 +0.44%
q.14p 14 Gm14:12506615 44.91 42–58 6.89 13.26 +0.44%
Stearic acid q.2.1s 2 Gm2:5946912 39 38–42 14.63 13.75 −1.16%
q.2.2s 2 Gm2:15552879 79.79 78–80 9.05 7.86 −0.52%
q.4s 4 Gm4:18312993 75.99 73–78 7.23 6.12 +1.24%
q.14s 14 Gm14:42206409 58 57–59 40.84 56.76 −5.00%
Oleic acid q.4o 4 Gm4:19496796 76.38 74–80 6.57 12.17 +1.37%
q.14o 14 Gm14:32290452 51 49–54 13.7 28.05 +2.9%
Linoleic acid q.4e 4 Gm4:32351007 78.88 73–84 6.74 14.75 −2.31%
q.14e 14 Gm14:34918500 54 45–63 4.48 9.49 +2.02%
Linolenic acid q.2n 2 Gm2:15552879 79.79 78–81 7.05 10.4 +0.33%
q.4n 4 Gm4:27332180 78.12 76–84 7.04 10.39 −0.21%
q.8n 8 Gm8:44116750 150 148–152 6.93 10.2 −0.15%
q.10n 10 Gm10:45310798 89.68 81–98 8.13 12.16 −0.42%
q.13n 13 Gm13:41141355 118.19 108–125 6.48 9.48 −0.17%
q.14n 14 Gm14:32372635 51.27 44–53 5.52 7.97 −0.25%
Plant height q.10h 10 Gm10:44639359 90 88–94 9.79 20.9 −6.54 cm
q.19h 19 Gm19:49398020 100.51 91–104 5.2 10.42 +5.03 cm
Oil q.9oi 9 Gm9:6801513 16 15–17 6.85 14.43 +0.28%
q.14oi 14 Gm14:42206409 62 49–68 9.43 20.58 +0.71%

QTL Effect” represents the impact of converting homozygous A6 alleles to homozygous 194D alleles. QTL, quantitative trait loci; Chr, chromosome; SNP, single nucleotide polymorphism; LOD, logarithm of the odds.