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. Author manuscript; available in PMC: 2017 Oct 28.
Published in final edited form as: J Nat Prod. 2016 Oct 13;79(10):2731–2739. doi: 10.1021/acs.jnatprod.6b00742

Table 5.

Overview on naturally occurring actinomycinsa,b

α-ring β-ring
(1) Actinomycin D as core structure
Actinomycin D Thr-D-Val-Pro-Sar-MeVal Thr-D-Val-Pro-Sar-MeVal
(2) N-demethyl actinomycins
Actinomycin D0 Thr-D-Val-Pro-Sar-MeVal Thr-D-Val-Pro-Gly-MeVal
N,N′-Didemethyl- actinomycin D Thr-D-Val-Pro-Gly-MeVal Thr-D-Val-Pro-Gly-MeVal
(2) C-type actinomycins
Actinomycin C2 Thr-D-Val-Pro-Sar-MeVal Thr-D-aIle-Pro-Sar-MeVal
Actinomycin C2a Thr-d-aIle-Pro-Sar-MeVal Thr-D-Val-Pro-Sar-MeVal
Actinomycin C3 Thr-D-aIle-Pro-Sar-MeVal Thr-D-aIle-Pro-Sar-MeVal
(3) F-type actinomycins
Actinomycin F8 Thr-D-Val-Sar-Sar-MeVal Thr-D-Val-Sar-Sar-MeVal
Actinomycin F9 Thr-D-Val-Sar-Sar-MeVal Thr-D-Val-Pro-Sar-MeVal Thr-D-Val-Pro-Sar-MeVal Thr-D-Val-Sar-Sar-MeVal
(4) X-type actinomycins
Actinomycin X Thr-D-Val-Sar-Sar-MeVal Thr-D-Val-Hyp-Sar-MeVal
Actinomycin X Thr-D-Val-Pro-Sar-MeVal Thr-D-Val-Hyp-Sar-MeVal
Actinomycin X Thr-D-Val-Pro-Sar-MeVal Thr-D-Val-aHyp-Sar-MeVal
Actinomycin X1a Thr-D-Val-Sar-Sar-MeVal Thr-D-Val-OPro-Sar-MeVal
Actinomycin X2 Thr-D-Val-Pro-Sar-MeVal Thr-D-Val-OPro-Sar-MeVal
(5) Z-type actinomycins
Actinomycin Z1 Thr-D-Val-HMPro-Sar-MeVal HThr-D-Val-MOPro-Sar-MeAla
Actinomycin Z2 Thr-D-Val-HMPro-Sar-MeVal Thr-D-Val-MOPro-Sar-MeAla
Actinomycin Z3 Thr-D-Val-HMPro-Sar-MeVal ClThr-D-Val-MOPro-Sar-MeAla
Actinomycin Z4 Thr-D-Val-MPro-Sar-MeVal Thr-D-Val-MOPro-Sar-MeAla
Actinomycin Z5 Thr-D-Val-MPro-Sar-MeVal ClThr-D-Val-MOPro-Sar-MeAla
Actinomycin Zp (5) Thr-D-Val-MPro-Sar-MeVal Thr-D-Val-MPro-Sar-MeVal
(6) G-type actinomycins
Actinomycin G1 Thr-D-Val-Pro-Sar-MeVal HThr-D-Val-HMPro-Sar-MeAla
Actinomycin G2 Thr-D-Val-HMPro-Sar-MeVal ClThr-D-Val-Pro-Sar-MeAla
Actinomycin G3 Thr-D-Val-HMPro-Sar-MeVal HThr-d-Val-Pro-Sar-MeAla
Actinomycin G4 Thr-D-Val-HMPro-Sar-MeVal Thr-D-Val-Pro-Sar-MeAla
Actinomycin G5 Thr-D-Val-HMPro-Sar-MeVal cHThr-D-Val-Pro-Sar-MeAla
Actinomycin G6 Thr-D-Val-HMPro-Sar-MeVal rHThr-D-Val-Pro-Sar-MeAla
(7) novel Y-type actinomycins
Actinomycin Y1 Thr-D-Val-HMPro-Sar-MeVal ClThr-D-Val-OPro-Sar-MeAla
Actinomycin Y2 Thr-D-Val-HMPro-Sar-MeVal ClThr-D-Val-Hyp-Sar-MeAla
Actinomycin Y3 Thr-D-Val-HMPro-Sar-MeVal rHThr-D-Val-OPro-Sar-MeAla
Actinomycin Y4 Thr-D-Val-HMPro-Sar-MeVal rHThr-D-Val-Hyp-Sar-MeAla
Actinomycin Y5 Thr-D-Val-HMPro-Sar-MeVal cThr-D-Val-OPro-Sar-MeAla
Actinomycin Y6 (1) Thr-D-Val-HMPro-Sar-MeVal crThr-D-Val-OPro-Sar-MeAla
Actinomycin Y7 (2) Thr-D-Val-HMPro-Sar-MeVal HThr-D-Val-OPro-Sar-MeAla
Actinomycin Y8 (3) Thr-D-Val-HMPro-Sar-MeVal Thr-D-Val-OPro-Sar-MeAla
Actinomycin Y9 (4) Thr-D-Val-MPro-Sar-MeVal Thr-D-Val- OPro -Sar-MeAla

Differences to actinomycin D are shown in bold letters. All amino acids are L-configuration except when indicated otherwise. Abbreviations: MeVal=N-methylvaline, MeAla=N-methyl-L-alanine, aIle=allo-isoleucine, Sar=sarcosine, MPro=cis-5-methylproline, HMPro=trans-3-hydroxy-cis-5-methylproline, Hyp=trans-4-hydroxyproline, OPro=4- oxoproline, MOPro=cis-5-methyl-4-oxoproline, aHyp=cis-4-hydroxyproline, HThr=4-hydroxythreonine, ClThr=4-chlorothreonine, cThr/cHThr=cyclic Thr or HThr, i.e. forming an additional ring closure to the chromophore, rHThr= rearrangement of the HThr (β-ring) connectivity.

a

This table was updated based on previous overview on naturally occurring actinomycins (ref. 3).

b

The numbers in red indicated compounds identified in this study