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. Author manuscript; available in PMC: 2018 Jan 4.
Published in final edited form as: Neuron. 2016 Dec 15;93(1):221–234. doi: 10.1016/j.neuron.2016.11.023

Figure 5. Direct evidence for two-dimensional dynamics in the Falkner, Krishna et al. dataset.

Figure 5

(A and B) PCA, where the variables are neurons and the observations are the instantaneous activity vectors during distractor trials, for the BG (A) and FK (B) datasets. Activity vectors during the transient visual responses to the distractor (600–1100 ms after target onset for BG, 450–750 ms after target onset for FK) were not included for this analysis because they involve activation of weak patterns. The majority of the variance is explained by one PC in BG, while a comparable proportion is explained by two PCs in FK, consistent with one-dimensional dynamics in BG and two-dimensional dynamics in FK.

(C) We hypothesize that the 2D space spanned by the top 2 PCs (colored as in B) in the FK data is the 2D space of S1 and D1 (Fig. 3C and Fig. 4C, G). We further hypothesize that the direction having the maximum mean firing rate within the 2D space of the 2 PCs is the putative a1 direction, since a1 represents concerted firing of neurons in an LN. We can thus find the putative a1 and d1 of the FK data by rotating the two PCs by an angle of arctan[mean( PC1)/mean( PC2)], where mean(•) denotes mean over the elements of a vector.

(D–G) The activation of a1 (D–E) and d1 (F–G) on FK distractor trials (D and F) and target trials (E and G). In D–E, the data putative a1 was derived as in C. To determine activation in the model, one cell was “recorded” from each of multiple simulated global networks to form the model population. To determine the model a1, suppose the ith cell of the model population is the jth cell from LN1 of the ith global network. Then the ith element of the model a1 is the jth element of the actual a1 of the ith global network. The model putative a1 was derived as in C but from the model population. The d1 directions are determined similarly. Each set of activations (e.g. the four activation traces of data putative a1 and d1 on target and distractor trials comprise a set) is normalized by its peak a1 activation on target trials—thus, DG share the same scale. Vertical dashed lines denote the onsets of the target and distractor.