TABLE 1.
Fission yeast strains, human cell lines, plasmids, and HIV-1 viral stocks
Strains, cell lines, plasmids, and viral stocks | Genotype and characteristics | Source or reference |
---|---|---|
S. pombe strains | ||
SP223 | Wild type, h−, ade6-216, leu1-32, ura4-294 | ATCC |
Q812 | Wild type, h−, leu1-32, ura4-294 | 49 |
Q1649 | Wild type, h−, leu1-32, ura4-294, gfp-hsp16 | 49 |
RE076 | SP223 with single copy of F34Ivpr integrated at ura4 locus; used for measuring Vpr-induced cell cycle G2 delay | 19 |
RE007 | SP223 with single copy of vpr integrated at ura4 locus; used for determining Vpr-induced cell killing | This study |
RE078 | SP223 with single copy of gfp-vpr integrated at ura4 locus; used for determining nuclear localization of Vpr | This study |
Mammalian cell lines | ||
HeLa | A cervical epithelial cell line | ATCC |
H9 | CD4+ cells derived from PBMC for high-yield permissive growth with HIV-1 | 44 |
CEM-SS | CD4+ cells derived from human T4-lymphoblastoid cells | 37 |
293T | An embryonic kidney fibroblast cell line | ATCC |
293T-632 | A 293T cell line expressing pVgRxR and pCMV-EBNA1 | 66 |
Plasmids | ||
pYZIN | Fission yeast expression vector with an inducible nmt1 promoter and a leu1 selectable marker | 63 |
pYZ3N | Same as pYZ1N but with a 5′ GFP-tag | 63 |
pSF173 | Fission yeast expression vector with an inducible nmt1 promoter and a 5′ HA-tag, ura4 selectable | ATCC |
pZY1 | Mammalian expression vector with a muristerone A-inducible promoter; geneticin-resistant | 66 |
pZH1 | Mammalian expression vector with a muristerone A-inducible promoter; hygromycin-resistant | 66 |
pCDNA3.1 | Mammalian expression vector with a CMV promoter; hygromycin-resistant | Invitrogen |
HIV-1 viral stocks | ||
HIV-1LAI Vpr (+) | HIV-1 viral laboratory (subtype B) strain LAI | 4 |
HIV-1NL4-3 Vpr (+) | Vpr-positive NL4-3-based HIV-1 vector pNLHX | 8 |
HIV-1NL4-3 Vpr (−) | Same as above; vpr gene is mutated at the start codon from ATG to GTG | 43 |
HIV-1 (VSV-G) Vpr (+) | Vpr-positive NL4-3-based HIV-1 vector. HIV-1 env gene is replaced by VSV-G gene | 8 |
HIV-1 (VSV-G) Vpr (−) | Same as above; vpr gene is mutated at the start codon from ATG to GTG | 43 |