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. 2017 Jan 6;16:1. doi: 10.1186/s12941-016-0177-6

Table 3.

Primers used to amplify and sequence the seven housekeeping genes in the E. coli isolates for the MLST analysis

Gene Primer sequences Usage
adk F 5′-ATTCTGCTTGGCGCTCCGGG -3′
R 5′-CCGTCAACTTTCGCGTATTT-3′
Amp/seq
fumC F 5′-TCACAGGTCGCCAGCGCTTC-3′
R 5′-GTACGCAGCGAAAAAGATTC-3′
Amp/seq
gyrB F 5′-TCGGCGACACGGATGACGG-3′
R 5′-ATCAGGCCTTCACGCGCATC-3′
Amp/seq
icd F 5′-ATGGAAAGTAAAGTAGTTGTTCCGGCACA-3′
R 5′-GGACGCAGCAGGATCTGTT-3′
Amp/seq
mdh F 5′-ATGAAAGTCGCAGTCCTCGGCGCTGCTGGCGG-3′
R 5′-TTAACGAACTCCTGCCCCAGAGCGATATCTTTCTT-3′
Amp/seq
purA F 5′-CGCGCTGATGAAAGAGATGA-3′
R 5′-CATACGGTAAGCCACGCAGA-3′
Amp/seq
recA F 5′-CGCATTCGCTTTACCCTGACC-3′
R 5′-TCTCGATCAGCTTCTCTTTT-3′
Amp/seq