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. 2004 Oct 4;101(41):14925–14930. doi: 10.1073/pnas.0406410101

Table 1. General features of the genome.

Chromosome pNF1 pNF2
Topology Circular Circular Circular
Length, bp 6,021,225 184,027 87,093
G+C content, % 70.8 67.2 68.4
Copy no.* 1 0.7 1.8
Protein-coding gene 5,674 160 90
Average CDS length, bp 960 963 832
Coding density, % 90.4 83.7 86.0
Function assigned 2,962 (52.2%) 53 (33.1%) 23 (25.6%)
Matched to hypothetical protein 1,533 (27.0%) 37 (23.1%) 26 (28.9%)
No database match 1,179 (20.8%) 70 (43.8%) 41 (45.5%)
rrn operon 3 0 0
tRNA gene 53 0 0

CDS, protein-coding sequences.

*

The copy numbers of pNF1 and pNF2 were estimated from the statistical distribution of random reads between the plasmids and the chromosome.