TABLE 3.
Characteristics of putative genes of pOR1
| ORF | Gene | Size (amino acids) | Similar gene product | Probable function | e value | Gen info identifier no. | Species |
|---|---|---|---|---|---|---|---|
| 1 | repA | 325 | Replication protein A | Plasmid replication | 3e-72 | 1075495 | Bacteroides vulgatus |
| 2 | rep2 | 143 | Replication protein 2 | 3e-24 | 10956802 | Riemerella anatipestifer | |
| 3 | trans | 201 | Transposase | Transposition | le-41 | 16082872 | Yersinia pestis |
| 4 | orf4 | 109 | None | ||||
| 5 | orf5 | 741 | TonB-linked outer membrane receptor | Iron uptake | 2e-33 | 29345912 | Bacteroides thetaiotamicron |
| 6 | yvgW | 675 | Heavy metal ion-transporting ATPase | Cadmium efflux | 1e-159 | 21398552 | Cytophaga hutchinsonii |
| 7 | orf7 | 103 | None | ||||
| 8 | merP | 291 | Periplasmic transport protein | Mercury efflux | 6e-04 | 2935549 | Pseudomonas alcaligenes |
| 9 | mlpB | 111 | Putative lipoprotein | Unknown | 2e-19 | 4467968 | Myxococcus xanthus |
| 10 | pcoA | 768 | Copper resistance protein | Copper binding | 1e-72 | 13632794 | Escherichia coli |
| 11 | orf11 | 187 | Chromosome assembly protein homolog | Chromosome assembly | 0.002 | 15606061 | Aquifex aeolicus |
| 12 | mbpB | 268 | Mobilization protein | Plasmid mobilization | 2e-10 | 915338 | Bacteroides fragilis |
| 13 | orf13 | 135 | None | ||||
| 14 | vapD | 93 | Virulence associated protein | Unknown | 2e-24 | 6136169 | Actinobacillus actinomycetemcomitans |