TABLE 3.
Identity of RdpA and SdpA to other α-ketoglutarate-dependent dioxygenases (determined by BlastP two sequences)
| Protein | Strain | No. of amino acids | Accession no. | Substrate | % Identity (no. with identity/total)
|
|
|---|---|---|---|---|---|---|
| RdpA | SdpA | |||||
| RdpA | S. herbicidovorans MH | 295 | AJ628859 | (R)-Dichlorprop | 30 (79/262) | |
| Delftia acidovorans MC1 | 295 | AAM90962 | (R)-Dichlorprop | |||
| SdpA | S. herbicidovorans MH | 287 | AJ628860 | (S)-Dichlorprop | 30 (79/262) | |
| TauD | E. coli K-12 | 283 | AAC73471 | Taurine | 33 (94/281) | 29 (82/280) |
| TauD | Pseudomonas aeruginosa | 277 | NP 252624 | Taurine | 35 (99/282) | 32 (91/277) |
| AtsK | Pseudomonas putida | 301 | AAD31784 | Alkyl sulfate esters | 31 (93/293) | 27 (77/277) |
| TfdA | Burkholderia cepacia (pIJB) | 288 | AAB47567 | 2,4-D | 28 (82/290) | 35 (90/252) |
| TfdA | Burkholderia sp. strain RASC | 297 | AAB17363 | 2,4-D | 26 (79/293) | 37 (107/284) |
| TfdA | Ralstonia eutropha JMP134(pJP4) | 287 | AAA21983 | 2,4-D | 30 (88/288) | 37 (107/287) |
| RdpA | Delftia acidovorans P4a | 287 | AAM76772 | 2,4-D | 28 (81/288) | 36 (105/286) |
| SdpA | Delftia acidovorans MC1 | 292 | AAM90963 | (S)-Dichlorprop | 27 (75/268) | 63 (183/290) |
| TfdAα | Strain RD-5-C2 (member of BANA cluster) | 295 | BAB92964 | 2,4-D | 28 (83/287) | 36 (106/288) |
| TfdA | Achromobacter xylosoxidans subsp. denitrificans | 287 | AAF59421 | 2,4-D | 27 (80/288) | 37 (106/286) |