Table 1.
The basic characteristics of three Cardiocrinum chloroplast genomes.
| Characteristics | C. giganteum | C. cathayanum | C. cordatum |
|---|---|---|---|
| Clean reads | 16,593,274 | 17,071,940 | 16,590,680 |
| Average read length (bp) | 125 | 125 | 125 |
| Number of contigs | 26,859 | 17,157 | 20,859 |
| Total length of contigs (bp) | 11,547,060 | 6,383,866 | 8,245,296 |
| N50 length of contigs (bp) | 391 | 351 | 366 |
| Total cpDNA size (bp) | 152,653 | 152,415 | 152,410 |
| LSC length (bp) | 82,344 | 82,368 | 82,186 |
| SSC length (bp) | 17,309 | 17,319 | 17,344 |
| IR length (bp) | 26,500 | 26,364 | 26,440 |
| Total CDS length (bp) | 72,870 | 72,201 | 72,846 |
| Total tRNA length (bp) | 2879 | 2880 | 2881 |
| Total rRNA length | 9046 | 9046 | 9050 |
| Total GC content (%) | 37.1 | 37.1 | 37.1 |
| LSC | 34.9 | 34.9 | 34.9 |
| SSC | 30.8 | 30.9 | 30.9 |
| IR | 42.5 | 42.5 | 42.5 |
| Total number of genes | 132 | 132 | 132 |
| Protein-coding genes | 78 | 78 | 78 |
| rRNAs genes | 4 | 4 | 4 |
| tRNAs genes | 30 | 30 | 30 |
| Duplicated genes | 20 | 20 | 20 |