Table 4.
Adventitious root sample | Raw data |
QC filtered data |
||
---|---|---|---|---|
Total no. of reads | Length (bp) | Total no. of reads | Length (bp) | |
CS, replicate 1 | 16,731,664 | 2,321,621,040 | 15,291,398 | 2,115,447,628 |
CS, replicate 2 | 14,306,820 | 1,977,938,763 | 12,831,592 | 1,766,225,247 |
CS, replicate 3 | 14,801,822 | 2,056,937,756 | 13,407,302 | 1,857,154,376 |
SH, replicate 1 | 17,526,160 | 2,446,652,196 | 15,710,392 | 2,185,318,113 |
SH, replicate 2 | 16,947,000 | 2,354,285,233 | 15,409,700 | 2,134,138,490 |
SH, replicate 3 | 16,426,236 | 2,281,803,413 | 14,810,282 | 2,050,279,385 |
CPa | 90,242,024 | 9,114,444,424 | 85,335,736 | 8,441,707,472 |
Total | 186,981,726 | 22,553,682,825 | 172,796,402 | 20,550,270,711 |
CP = Chunpoong; CS = Cheongsun; SH = Sunhyang.
RNA-seq data from CP were obtained from a previous study [20].