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. 2016 Jan 9;41(1):60–68. doi: 10.1016/j.jgr.2015.12.012

Table 4.

Summary of transcriptome data from adventitious roots of three Panax ginseng cultivars

Adventitious root sample Raw data
QC filtered data
Total no. of reads Length (bp) Total no. of reads Length (bp)
CS, replicate 1 16,731,664 2,321,621,040 15,291,398 2,115,447,628
CS, replicate 2 14,306,820 1,977,938,763 12,831,592 1,766,225,247
CS, replicate 3 14,801,822 2,056,937,756 13,407,302 1,857,154,376
SH, replicate 1 17,526,160 2,446,652,196 15,710,392 2,185,318,113
SH, replicate 2 16,947,000 2,354,285,233 15,409,700 2,134,138,490
SH, replicate 3 16,426,236 2,281,803,413 14,810,282 2,050,279,385
CPa 90,242,024 9,114,444,424 85,335,736 8,441,707,472
Total 186,981,726 22,553,682,825 172,796,402 20,550,270,711

CP = Chunpoong; CS = Cheongsun; SH = Sunhyang.

a

RNA-seq data from CP were obtained from a previous study [20].